GeoMx Data Center

How it Works

The GeoMx DSP data center software uniquely combines system control to visualize whole tissue images at single cell resolution with automated region of interest selection to rapidly spatially profile tissue sections. The fully integrated workflow provides tracking of image data and corresponding profiling data, allowing users to easily go from data collection to data analysis.

See the biology faster

Biologically directed Region of Interest (ROI) selection and automated segmentation to find the most important areas in your tissue

Optimized algorithms to automatically segment tissue based on morphology markers to understand tissue compartments
Flexible selection tools to define the ROI to the shape of the biology of interest
Select specific cell populations using morphology markers

Learn more in the ROI selection course series in NanoString University.

Discover the biology faster

Integrated interactive analysis between tissue and expression resulting in truly spatial biological interpretation

Distinguish statistical changes between groups (e.g. t-tests, linear mixed models) to determine if biologically significant or an outlier
Visualize large data matrices using clustering analyses to determine significant changes associated with specific tissue morphology or cell type
Understand which genes and pathways are altered in spatially annotated datasets

Learn more in the GeoMx data analysis course in NanoString University.

Publish the biology faster

Expansive analysis and visualization providing insights which drive faster time to publication

Integrated nCounter and NGS data QC provide seamless data quality assessment.
Normalization by cell density (automated cell counting) or area-based normalization.
Perform pathway analyses to understand disease mechanisms of action and identify novel targets.
Integrate custom biostatistics scripts for enhanced analysis
Exportable publication quality images and figures