Spatial Tissue Book

What is the Spatial Tissue Book?

The Spatial Tissue Book is a repository of images, data, selection and segmentation strategies for different tissue types and diseases that have been analyzed through either the GeoMx® DSP Technology Access Program or the CosMx™ SMI Technology Access Program.

Each individual PDF page of the Tissue Book includes images of the tissue and is annotated by the disease(s) studied, species of interest, and type of assay performed.

Why Use the Tissue Book?

  • See representative images for tissues and/or disease areas that you are studying.
  • Get ideas on how to select ROIs and segment the tissue to meet your study design needs.
  • Review spatial transcriptomics data from different tissues representing various diseases.
Explore the anatomy of a GeoMx tissue book page
Tissue Book page example with charts, images, diagrams and other information

Tissue Book Collection

Browse entries here, or just download the complete tissue book.

Filter Entries

Tissue Tissue Biology Species Type Assay Instrument
Lung NSCLC HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Liver Normal HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Liver Hepatocellular Carcinoma HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
Brain Normal MouseFresh FrozenCosMx Mouse Neuroscience PanelCosMxDownload
Breast Breast Cancer HumanFFPE1000-Plex Human RNA Universal Cell CharacterizationCosMxDownload
KidneyPediatric Renal AllograftHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
Lymph NodeLymphomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungLung CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
SkinHidradenitis SuppurativaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
BrainParkinson's DiseaseMouseFFPEMouse Whole Transcriptome AtlasGeoMxDownload
OvaryOvarian CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
Brain Schizophrenia HumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
BreastBreast CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
ColonColonic AdenomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
EsophagusBarrett's MucosaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
KidneyKidney CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LiverHepatocellular CarcinomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungCOVID-19HumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungTuberculosisHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
LungNSCLCHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
MuscleMyositisHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
PlacentaChronic Intervillositis of Unknown EtiologyHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
ProstateProstate CancerHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload
SkinMelanomaHumanFFPEHuman Whole Transcriptome AtlasGeoMxDownload

Related Resources

DSP Technology Access Program
CosMx SMI Technology Access Program
GeoMx Morphology Markers
Spatial Organ Atlas