GeoMx® Human Whole Transcriptome Atlas

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Full Transcriptome Spatial RNA Analysis

The GeoMx Human Whole Transcriptome Atlas (GeoMx Hu WTA) is designed for comprehensive profiling of spatial biology. With full coverage of protein coding genes, GeoMx Hu WTA delivers spatial analysis of any target in any tissue in the biological regions that matter most.

How it Works

The GeoMx Human Whole Transcriptome Atlas (GeoMx Hu WTA) provides an unbiased view of 18,000+ protein-coding genes. The GeoMx Hu WTA unlocks new pathways to be explored by researchers and enables GeoMx RNA profiling in oncology, immunology, neuroscience, developmental biology, and other diverse fields. GeoMx Hu WTA provides robust and sensitive performance on FFPE or Fresh Frozen samples.



Comprehensive, unbiased RNA content for human and mouse


Explore any target and any pathway in biological regions of interest


Compatible with RNAscope® and antibody morphology markers


For use with next-generation sequencer (NGS) readout and compatible with DSP Data Center

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Opposing immune and genetic mechanisms shape oncogenic programs in synovial sarcoma

Synovial sarcoma (SyS) is an aggressive neoplasm driven by the SS18-SSX fusion, and is characterized by low T cell infiltration. Here, we studied the cancer-immune interplay in SyS using an integrative approach that combines single-cell RNA sequencing (scRNA-seq), spatial profiling and genetic and pharmacological perturbations.

The spatial landscape of lung pathology during COVID-19 progression

Recent studies have provided insights into the pathology and immune response to coronavirus disease 2019 (COVID-19)1–8. However, thorough interrogation of the interplay between infected cells and the immune system at sites of infection is lacking.

Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection

The relationship of SARS-CoV-2 pulmonary infection and severity of disease is not fully understood. Here we show analysis of autopsy specimens from 24 patients who succumbed to SARS-CoV-2 infection using a combination of different RNA and protein analytical platforms to characterize inter-patient and intra-patient heterogeneity of pulmonary virus infection.

Related Resources

See All Resources
Product Bulletin GeoMx Human Whole Transcriptome Atlas – Product Bulletin
Brochure/eBook GeoMx DSP – Brochure
Gene Targets Access the GeoMx Human Whole Transcriptome Atlas via UCSC Genome Browser
App Note/Tech Note Ultra-High-Plex Spatial Proteogenomics of FFPE Tissue Sections
Whitepaper The GeoMx® Human Whole TranscriptomeAtlas for the Digital Spatial Profiler-White Paper
Manual/Instructions GeoMx® DSP: Data Analysis for NGS Readout

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