Spatial Organ Atlas: Human Lymph Node

Explore the GeoMx WTA Human Lymph Node Data

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See how imaging and molecular data combine to give you a comprehensive profile of the tissue architecture and biology through this Minerva Story.

Human Lymph Node Metadata
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Human Lymph Node Metadata

This cohort contains 5 samples:

  • Sex: 1 Male and 4 Females
  • Race: 4 White and 1 Asian
  • Age Range: 44 years to 59 years
  • BMI: Unknown

Whole Transcriptome Atlas Profiling: ​

  • >18,000 genes​
  • 5μm FFPE tissue section​

Area of Illumination (AOI) Profiling Strategy:​

  • 193 AOIs total
  • Placed on key multicellular features ​
  • Geometric polygons and segmented compartmentalization strategy ​

Morphology Markers:​

  • SMA – Fibroblasts (trabeculae)  ​
  • CD11c – Dendritic cells
  • CD3E – T cells (T cell zone)​
  • CD20 – B cells (B cell zone)​
  • DNA – Nuclei​
Data Downloads

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