
Category: CosMx SMI
March 3, 2023 / Genome Biol
SRTsim: spatial pattern preserving simulations for spatially resolved transcriptomics
Spatially resolved transcriptomics (SRT)-specific computational methods are often developed, tested, validated, and evaluated in silico using simulated data. Unfortunately, existing simulated SRT data are often poorly documented, hard to reproduce,…
December 21, 2022 / Brief Bioinform
spaCI: deciphering spatial cellular communications through adaptive graph model
December 13, 2022 / Genome Biol
Spatial omics technologies at multimodal and single cell/subcellular level
December 10, 2022 / Nat Commun
Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding
October 6, 2022 / Nat Biotechnol
High-plex imaging of RNA and proteins at subcellular resolution in fixed tissue by spatial molecular imaging
September 30, 2022 / Front Microbiol
The impact of single-cell genomics on the field of mycobacterial infection
September 1, 2022 / Comput Struct Biotechnol J
Computational Solutions for Spatial Transcriptomics
August 18, 2022 / Semin Immunopathol
Revisiting transplant immunology through the lens of single-cell technologies
May 19, 2022 / Res Pract Thromb Haemost
Molecular analysis of vascular gene expression
May 5, 2022 / Nat Biotechnol
DIALOGUE maps multicellular programs in tissue from single-cell or spatial transcriptomics data
April 26, 2022 / ACS Meas Sci Au