Workshop of Spatial Data Analysis on the GeoMx® Digital Spatial Profiler

In-Person Seminar
Universitätsklinikum Augsburg, Stenglinstraße 2, 86156 Augsburg

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This event will feature a live training session where users can learn how to utilize the GeoMx Digital Spatial Profiling (DSP) Data Analysis Suite. Topics covered include:

  • NGS read-out and file conversions
  • Data Quality Control
  • Normalization
  • Visualizations
  • Additional tools
Tumor/TME animation

The GeoMx DSP Data Center provides an end-to-end software solution from image acquisition and region of interest selection to a fully integrated data analysis experience. The fully integrated workflow provides tracking of image data and corresponding profiling data, allowing users to easily go from data collection to data analysis.

From 9AM to 12AM, our team will be available for project consultations and to answer any GeoMx-related questions from project design, morphology marker optimization, automated workflows or data analysis. To book a project consultation, please write to Christoph König.

13:00GeoMx NGS readout general   
13:30File Conversion FASTQ to DCC files details
13:45 Q&A around NGS file conversion
14:15 Break
14:15 Initial Data QC, within DSP Data Analysis Suite and outside
15:00Data Analysis using on instrument Software
15:30 Data Analysis Q&A
16:00Data Analysis solutions outside from Instrument
16:30Concluding remarks

Speaker

Christoph König

Senior Product Application Scientist, NanoString